Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm14677-201ENSMUST00000117866 486 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm13641-201ENSMUST00000117993 473 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm15149-201ENSMUST00000119370 360 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Snrpert-201ENSMUST00000121967 279 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm23662-201ENSMUST00000158046 111 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm23852-201ENSMUST00000158376 77 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm2855-201ENSMUST00000166765 456 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm8032-201ENSMUST00000171009 574 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm23379-201ENSMUST00000180026 107 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm11392-201ENSMUST00000181419 710 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm27538-201ENSMUST00000185065 294 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm18406-201ENSMUST00000185872 669 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm29064-201ENSMUST00000187014 813 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm5252-201ENSMUST00000189030 909 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm18407-201ENSMUST00000192126 790 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm37375-201ENSMUST00000193859 387 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm38019-201ENSMUST00000195133 380 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm37385-201ENSMUST00000195223 387 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm44361-201ENSMUST00000197960 94 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm43798-201ENSMUST00000202056 394 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm44050-201ENSMUST00000204263 527 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm18855-201ENSMUST00000206689 570 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm44773-201ENSMUST00000207374 557 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm46364-201ENSMUST00000218548 319 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Col8a1Q00780 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Col8a1Q00780 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm12021-201ENSMUST00000121061 1746 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm26422-201ENSMUST00000104276 132 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm23440-201ENSMUST00000104299 130 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm9427-201ENSMUST00000116187 651 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm14366-201ENSMUST00000121970 730 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm3757-201ENSMUST00000125878 675 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Mir6903-201ENSMUST00000183597 88 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm27152-201ENSMUST00000183828 99 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm18447-201ENSMUST00000187501 307 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm18971-201ENSMUST00000197240 374 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm42652-201ENSMUST00000199073 614 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm43171-201ENSMUST00000199882 291 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col8a1Q00780 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.55□□□□□ -1.52
Col8a1Q00780 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.55□□□□□ -1.52
Col8a1Q00780 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms