Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm15766-201ENSMUST00000118025 813 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm2199-201ENSMUST00000119065 874 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm23537-201ENSMUST00000157536 330 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm37070-201ENSMUST00000193272 460 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm44048-201ENSMUST00000204531 361 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm45660-201ENSMUST00000210267 151 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm18850-201ENSMUST00000211578 388 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 AC079644.3-201ENSMUST00000222452 357 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm18247-201ENSMUST00000222937 601 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Zfp429-203ENSMUST00000224684 524 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm13311-201ENSMUST00000117863 379 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm11975-201ENSMUST00000118772 481 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm8430-201ENSMUST00000119780 471 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm11825-201ENSMUST00000120710 736 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm7609-204ENSMUST00000161424 461 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Mir5103-201ENSMUST00000175111 79 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm2914-201ENSMUST00000186120 328 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm43794-201ENSMUST00000200971 692 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm9278-201ENSMUST00000205508 553 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Gm18541-201ENSMUST00000215935 538 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 CT485612.1-201ENSMUST00000222555 382 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx3-1P97436 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Mir31-201ENSMUST00000083474 106 ntBASIC4.77□□□□□ -1.65
Nkx3-1P97436 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx3-1P97436 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms