Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Tnfsf4P43488 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Tnfsf4P43488 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Tnfsf4P43488 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Tnfsf4P43488 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Tnfsf4P43488 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.09□□□□□ -1.6
Tnfsf4P43488 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm23593-201ENSMUST00000104309 120 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm22374-201ENSMUST00000104583 132 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm15981-201ENSMUST00000119196 457 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm26489-201ENSMUST00000157880 264 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.08□□□□□ -1.6
Tnfsf4P43488 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Tnfsf4P43488 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm42522-201ENSMUST00000196071 255 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Mir409-201ENSMUST00000198153 79 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm18482-201ENSMUST00000202405 760 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm272-201ENSMUST00000222073 919 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Tnfsf4P43488 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.08□□□□□ -1.6
Tnfsf4P43488 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Tnfsf4P43488 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm2199-201ENSMUST00000119065 874 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm14938-201ENSMUST00000119482 943 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm12482-201ENSMUST00000120435 630 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm25430-201ENSMUST00000157614 289 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Scarna13-201ENSMUST00000158164 275 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm25348-201ENSMUST00000158961 111 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm44253-201ENSMUST00000203387 628 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm8526-201ENSMUST00000079153 475 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm23508-201ENSMUST00000083079 72 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.07□□□□□ -1.6
Tnfsf4P43488 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Tnfsf4P43488 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm11737-201ENSMUST00000118713 468 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm24687-201ENSMUST00000157758 241 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm23662-201ENSMUST00000158046 111 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm27887-201ENSMUST00000184367 102 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms