Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sox6P40645 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox6P40645 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox6P40645 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox6P40645 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Sox6P40645 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox6P40645 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Sox6P40645 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox6P40645 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.12□□□□□ -1.59
Sox6P40645 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.12□□□□□ -1.59
Sox6P40645 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox6P40645 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.12□□□□□ -1.59
Sox6P40645 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sox6P40645 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.12□□□□□ -1.59
Sox6P40645 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sox6P40645 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sox6P40645 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sox6P40645 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sox6P40645 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sox6P40645 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm12683-201ENSMUST00000117528 415 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm5405-201ENSMUST00000120478 609 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.11□□□□□ -1.59
Sox6P40645 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.11□□□□□ -1.59
Sox6P40645 Gm26069-201ENSMUST00000157497 277 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm23280-201ENSMUST00000157905 139 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm25459-201ENSMUST00000157953 114 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm23964-201ENSMUST00000157966 107 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Gm16531-201ENSMUST00000180658 967 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Mir6921-201ENSMUST00000183719 80 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm8241-201ENSMUST00000189286 816 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm9317-201ENSMUST00000197055 862 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm44431-201ENSMUST00000203500 413 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Gm44571-201ENSMUST00000208092 533 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm31166-201ENSMUST00000209326 288 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm45525-201ENSMUST00000210800 389 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm45734-201ENSMUST00000211916 411 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm4510-201ENSMUST00000218265 427 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm10145-201ENSMUST00000077776 462 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Mir143-201ENSMUST00000083511 63 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Sox6P40645 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.11□□□□□ -1.59
Sox6P40645 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sox6P40645 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.11□□□□□ -1.59
Sox6P40645 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Sox6P40645 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Sox6P40645 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox6P40645 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox6P40645 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox6P40645 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sox6P40645 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sox6P40645 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox6P40645 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Sox6P40645 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Sox6P40645 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Gm12244-201ENSMUST00000119500 291 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Gm11533-201ENSMUST00000120287 477 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Gm7309-201ENSMUST00000121670 581 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox6P40645 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox6P40645 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.1□□□□□ -1.59
Sox6P40645 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sox6P40645 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Sox6P40645 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox6P40645 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox6P40645 Mir7220-201ENSMUST00000183978 60 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Gm27679-201ENSMUST00000184612 84 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox6P40645 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Sox6P40645 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.1□□□□□ -1.59
Sox6P40645 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.1□□□□□ -1.59
Sox6P40645 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.1□□□□□ -1.59
Sox6P40645 Gm37203-201ENSMUST00000191618 385 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Gm8826-201ENSMUST00000193161 948 ntBASIC5.1□□□□□ -1.59
Sox6P40645 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms