Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.39□□□□□ -1.39
Usp4P35123 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp4P35123 AC155305.1-201ENSMUST00000222207 319 ntBASIC6.39□□□□□ -1.39
Usp4P35123 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.39□□□□□ -1.39
Usp4P35123 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.39□□□□□ -1.39
Usp4P35123 Gm15732-201ENSMUST00000079794 480 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp4P35123 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp4P35123 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp4P35123 Gm37598-201ENSMUST00000194506 1301 ntBASIC6.39□□□□□ -1.39
Usp4P35123 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp4P35123 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp4P35123 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp4P35123 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp4P35123 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Usp4P35123 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.39□□□□□ -1.39
Usp4P35123 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.38□□□□□ -1.39
Usp4P35123 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.38□□□□□ -1.39
Usp4P35123 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.38□□□□□ -1.39
Usp4P35123 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm12225-201ENSMUST00000117995 298 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm13501-201ENSMUST00000118477 979 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm14985-201ENSMUST00000118693 786 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm15750-201ENSMUST00000120970 616 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm14589-201ENSMUST00000121640 727 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm14848-201ENSMUST00000121850 467 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm11879-201ENSMUST00000121885 702 ntBASIC6.38□□□□□ -1.39
Usp4P35123 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Gm24435-201ENSMUST00000157886 110 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm24417-201ENSMUST00000178123 79 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm24653-201ENSMUST00000178541 79 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm25934-201ENSMUST00000178642 79 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm4845-201ENSMUST00000179202 562 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm26991-201ENSMUST00000180950 620 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm29073-201ENSMUST00000185563 664 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm18342-201ENSMUST00000186987 694 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp4P35123 Gm2427-201ENSMUST00000189121 881 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Usp4P35123 Gm29165-201ENSMUST00000190655 664 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm29211-201ENSMUST00000191470 664 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm17967-201ENSMUST00000195319 647 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm3544-201ENSMUST00000196129 305 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 Gm44163-201ENSMUST00000205140 475 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp4P35123 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.38□□□□□ -1.39
Usp4P35123 AC137902.2-201ENSMUST00000227989 576 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp4P35123 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp4P35123 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp4P35123 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Usp4P35123 Gm10205-201ENSMUST00000087431 234 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp4P35123 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp4P35123 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.38□□□□□ -1.39
Usp4P35123 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Usp4P35123 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp4P35123 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp4P35123 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Usp4P35123 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp4P35123 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.37□□□□□ -1.39
Usp4P35123 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp4P35123 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp4P35123 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp4P35123 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.37□□□□□ -1.39
Usp4P35123 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.37□□□□□ -1.39
Usp4P35123 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp4P35123 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.37□□□□□ -1.39
Usp4P35123 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp4P35123 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.37□□□□□ -1.39
Usp4P35123 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms