Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm19060-201ENSMUST00000201959 421 ntBASIC4.85□□□□□ -1.63
P20040 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.85□□□□□ -1.63
P20040 Gm9278-201ENSMUST00000205508 553 ntBASIC4.85□□□□□ -1.63
P20040 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.85□□□□□ -1.63
P20040 Gm45525-201ENSMUST00000210800 389 ntBASIC4.85□□□□□ -1.63
P20040 AC102287.1-201ENSMUST00000211412 454 ntBASIC4.85□□□□□ -1.63
P20040 Gm18996-201ENSMUST00000214851 755 ntBASIC4.85□□□□□ -1.63
P20040 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.85□□□□□ -1.63
P20040 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.85□□□□□ -1.63
P20040 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.85□□□□□ -1.63
P20040 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
P20040 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
P20040 Gm23927-201ENSMUST00000082466 215 ntBASIC4.85□□□□□ -1.63
P20040 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.85□□□□□ -1.63
P20040 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
P20040 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
P20040 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.85□□□□□ -1.63
P20040 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.85□□□□□ -1.63
P20040 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
P20040 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
P20040 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.85□□□□□ -1.63
P20040 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.85□□□□□ -1.63
P20040 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
P20040 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.85□□□□□ -1.63
P20040 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.85□□□□□ -1.63
P20040 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
P20040 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.84□□□□□ -1.63
P20040 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.84□□□□□ -1.63
P20040 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
P20040 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P20040 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.84□□□□□ -1.63
P20040 AC121997.2-201ENSMUST00000228095 2294 ntBASIC4.84□□□□□ -1.63
P20040 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
P20040 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Ear-ps2-201ENSMUST00000100689 466 ntBASIC4.84□□□□□ -1.63
P20040 Gm15233-201ENSMUST00000118747 400 ntBASIC4.84□□□□□ -1.63
P20040 Gm13866-201ENSMUST00000118901 968 ntBASIC4.84□□□□□ -1.63
P20040 Gm14335-201ENSMUST00000119165 810 ntBASIC4.84□□□□□ -1.63
P20040 Gm13473-201ENSMUST00000119289 367 ntBASIC4.84□□□□□ -1.63
P20040 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC4.84□□□□□ -1.63
P20040 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.84□□□□□ -1.63
P20040 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Gm25152-201ENSMUST00000157117 114 ntBASIC4.84□□□□□ -1.63
P20040 Gm22916-201ENSMUST00000157616 119 ntBASIC4.84□□□□□ -1.63
P20040 Gm24692-201ENSMUST00000157761 146 ntBASIC4.84□□□□□ -1.63
P20040 Gm26170-201ENSMUST00000158419 148 ntBASIC4.84□□□□□ -1.63
P20040 Gm16139-201ENSMUST00000160015 420 ntBASIC4.84□□□□□ -1.63
P20040 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Gm20401-201ENSMUST00000173717 212 ntBASIC4.84□□□□□ -1.63
P20040 Mir3095-201ENSMUST00000175552 87 ntBASIC4.84□□□□□ -1.63
P20040 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.84□□□□□ -1.63
P20040 Gm22420-201ENSMUST00000178795 126 ntBASIC4.84□□□□□ -1.63
P20040 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm27781-201ENSMUST00000185185 92 ntBASIC4.84□□□□□ -1.63
P20040 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.84□□□□□ -1.63
P20040 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.84□□□□□ -1.63
P20040 Gm5066-201ENSMUST00000188479 822 ntBASIC4.84□□□□□ -1.63
P20040 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Gm2429-201ENSMUST00000194635 586 ntBASIC4.84□□□□□ -1.63
P20040 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC4.84□□□□□ -1.63
P20040 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.84□□□□□ -1.63
P20040 Gm31166-201ENSMUST00000209326 288 ntBASIC4.84□□□□□ -1.63
P20040 LOC665443-201ENSMUST00000212284 796 ntBASIC4.84□□□□□ -1.63
P20040 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P20040 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.84□□□□□ -1.63
P20040 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.84□□□□□ -1.63
P20040 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.84□□□□□ -1.63
P20040 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
P20040 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
P20040 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P20040 Snord59a-201ENSMUST00000082844 74 ntBASIC4.84□□□□□ -1.63
P20040 Gm23795-201ENSMUST00000084006 137 ntBASIC4.84□□□□□ -1.63
P20040 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P20040 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.84□□□□□ -1.64
P20040 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
P20040 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
P20040 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
P20040 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms