Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm11584-201ENSMUST00000120636 325 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm13077-201ENSMUST00000121941 484 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm3757-201ENSMUST00000125878 675 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.58□□□□□ -1.68
Cdx1P18111 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm24719-201ENSMUST00000157520 110 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm24402-201ENSMUST00000157873 91 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm24395-201ENSMUST00000158139 125 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm26169-201ENSMUST00000158420 135 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm15257-201ENSMUST00000177680 883 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm15252-201ENSMUST00000177750 883 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm15256-201ENSMUST00000177793 883 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm15260-201ENSMUST00000179402 883 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm9443-201ENSMUST00000188406 816 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm37837-201ENSMUST00000191743 604 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm37614-201ENSMUST00000195645 210 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm31861-201ENSMUST00000204563 672 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm45185-201ENSMUST00000207556 404 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm19169-201ENSMUST00000220109 1246 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cdx1P18111 n-R5s180-201ENSMUST00000082770 106 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Cdx1P18111 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cdx1P18111 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm9519-201ENSMUST00000206108 1337 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm23440-201ENSMUST00000104299 130 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm14385-201ENSMUST00000116315 876 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm16149-201ENSMUST00000117631 309 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm11877-201ENSMUST00000118921 852 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm11227-201ENSMUST00000119774 471 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm15194-201ENSMUST00000120453 434 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm15267-201ENSMUST00000120888 464 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm23121-201ENSMUST00000157653 173 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm24103-201ENSMUST00000174930 77 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Mirt2-201ENSMUST00000175179 285 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.57□□□□□ -1.68
Cdx1P18111 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm29552-201ENSMUST00000190548 660 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm20239-201ENSMUST00000196610 982 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm17824-201ENSMUST00000197690 805 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm43015-201ENSMUST00000199087 565 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm44817-201ENSMUST00000205416 453 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm19033-201ENSMUST00000208516 964 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm18205-201ENSMUST00000209215 841 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Gm9321-201ENSMUST00000221179 778 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm9292-201ENSMUST00000222008 710 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm19195-201ENSMUST00000222018 511 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 AC154633.1-201ENSMUST00000223276 449 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gm8256-203ENSMUST00000228692 591 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdx1P18111 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.57□□□□□ -1.68
Cdx1P18111 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Cdx1P18111 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Cdx1P18111 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx1P18111 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms