Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5493S4R2D1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5493S4R2D1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5493S4R2D1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5493S4R2D1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Gm5493S4R2D1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5493S4R2D1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5493S4R2D1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5493S4R2D1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5493S4R2D1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5493S4R2D1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms