Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.16■□□□□ 0.18
H2afb1S4R1E0 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.16■□□□□ 0.18
H2afb1S4R1E0 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb1S4R1E0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
H2afb1S4R1E0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
H2afb1S4R1E0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
H2afb1S4R1E0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
H2afb1S4R1E0 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb1S4R1E0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1S4R1E0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1S4R1E0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Tgds-204ENSMUST00000228543 1594 ntBASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1S4R1E0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1S4R1E0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms