Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Mir6349-201ENSMUST00000184059 97 ntBASIC17.09■□□□□ 0.33
Ccdc166S4R181 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.09■□□□□ 0.33
Ccdc166S4R181 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.09■□□□□ 0.33
Ccdc166S4R181 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc166S4R181 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc166S4R181 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc166S4R181 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc166S4R181 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.08■□□□□ 0.33
Ccdc166S4R181 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.08■□□□□ 0.32
Ccdc166S4R181 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Gm9987-201ENSMUST00000069768 567 ntBASIC17.08■□□□□ 0.32
Ccdc166S4R181 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.08■□□□□ 0.32
Ccdc166S4R181 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc166S4R181 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Golph3-205ENSMUST00000228671 2842 ntBASIC17.07■□□□□ 0.32
Ccdc166S4R181 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc166S4R181 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Gm18025-201ENSMUST00000221733 862 ntBASIC17.07■□□□□ 0.32
Ccdc166S4R181 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.07■□□□□ 0.32
Ccdc166S4R181 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc166S4R181 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc166S4R181 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc166S4R181 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.06■□□□□ 0.32
Ccdc166S4R181 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc166S4R181 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc166S4R181 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Gm42545-201ENSMUST00000202755 922 ntBASIC17.04■□□□□ 0.32
Ccdc166S4R181 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc166S4R181 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc166S4R181 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc166S4R181 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc166S4R181 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms