Protein–RNA interactions for Protein: Q9Z2A0

Pdpk1, 3-phosphoinositide-dependent protein kinase 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1Q9Z2A0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.05■□□□□ 0.48
Pdpk1Q9Z2A0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdpk1Q9Z2A0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdpk1Q9Z2A0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdpk1Q9Z2A0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdpk1Q9Z2A0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pdpk1Q9Z2A0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pdpk1Q9Z2A0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.02■□□□□ 0.47
Pdpk1Q9Z2A0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdpk1Q9Z2A0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms