Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Gm13559-201ENSMUST00000120476 863 ntBASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Gm38027-201ENSMUST00000192315 235 ntBASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcb1Q9Z0H3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcb1Q9Z0H3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Smarcb1Q9Z0H3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Smarcb1Q9Z0H3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Gm12085-201ENSMUST00000119263 940 ntBASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcb1Q9Z0H3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcb1Q9Z0H3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Gm13401-201ENSMUST00000117074 291 ntBASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcb1Q9Z0H3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms