Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CcsQ9WU84 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.84□□□□□ -0.19
CcsQ9WU84 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.84□□□□□ -0.19
CcsQ9WU84 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CcsQ9WU84 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.84□□□□□ -0.19
CcsQ9WU84 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.84□□□□□ -0.19
CcsQ9WU84 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.84□□□□□ -0.19
CcsQ9WU84 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CcsQ9WU84 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
CcsQ9WU84 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CcsQ9WU84 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CcsQ9WU84 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CcsQ9WU84 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.83□□□□□ -0.2
CcsQ9WU84 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.83□□□□□ -0.2
CcsQ9WU84 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Dancr-204ENSMUST00000132389 2347 ntBASIC13.83□□□□□ -0.2
CcsQ9WU84 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CcsQ9WU84 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.83□□□□□ -0.2
CcsQ9WU84 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.83□□□□□ -0.2
CcsQ9WU84 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CcsQ9WU84 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CcsQ9WU84 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcsQ9WU84 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.82□□□□□ -0.2
CcsQ9WU84 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CcsQ9WU84 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CcsQ9WU84 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CcsQ9WU84 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CcsQ9WU84 Gm11421-201ENSMUST00000122124 294 ntBASIC13.82□□□□□ -0.2
CcsQ9WU84 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CcsQ9WU84 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcsQ9WU84 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.81□□□□□ -0.2
CcsQ9WU84 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CcsQ9WU84 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CcsQ9WU84 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CcsQ9WU84 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcsQ9WU84 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CcsQ9WU84 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CcsQ9WU84 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CcsQ9WU84 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.8□□□□□ -0.2
CcsQ9WU84 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.8□□□□□ -0.2
CcsQ9WU84 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.8□□□□□ -0.2
CcsQ9WU84 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.8□□□□□ -0.2
CcsQ9WU84 Gm40848-201ENSMUST00000221998 324 ntBASIC13.8□□□□□ -0.2
CcsQ9WU84 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CcsQ9WU84 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms