Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.98■□□□□ 0.47
Col4a4Q9QZR9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col4a4Q9QZR9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Gm15794-201ENSMUST00000120182 631 ntBASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Gm37935-201ENSMUST00000192012 982 ntBASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a4Q9QZR9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Gm45328-201ENSMUST00000210942 917 ntBASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a4Q9QZR9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col4a4Q9QZR9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col4a4Q9QZR9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a4Q9QZR9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.94■□□□□ 0.46
Col4a4Q9QZR9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a4Q9QZR9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Gm2651-201ENSMUST00000203560 838 ntBASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a4Q9QZR9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms