Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shroom3Q9QXN0 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shroom3Q9QXN0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Flg-201ENSMUST00000050758 1488 ntBASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.86■□□□□ 0.45
Shroom3Q9QXN0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.85■□□□□ 0.45
Shroom3Q9QXN0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Gm18666-201ENSMUST00000190039 958 ntBASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom3Q9QXN0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom3Q9QXN0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom3Q9QXN0 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.83■□□□□ 0.45
Shroom3Q9QXN0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom3Q9QXN0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom3Q9QXN0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom3Q9QXN0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom3Q9QXN0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom3Q9QXN0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom3Q9QXN0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shroom3Q9QXN0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms