Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Gm42660-201ENSMUST00000197733 947 ntBASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Gm18515-201ENSMUST00000219755 797 ntBASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Msh5Q9QUM7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Msh5Q9QUM7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Gm13323-201ENSMUST00000120245 1151 ntBASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Msh5Q9QUM7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Msh5Q9QUM7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Msh5Q9QUM7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm12106-201ENSMUST00000116006 1200 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.09■□□□□ 0.49
Msh5Q9QUM7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms