Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Gm37055-201ENSMUST00000191866 133 ntBASIC16.21■□□□□ 0.19
Prg4Q9JM99 Gm10517-202ENSMUST00000192970 758 ntBASIC16.21■□□□□ 0.19
Prg4Q9JM99 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prg4Q9JM99 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prg4Q9JM99 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prg4Q9JM99 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prg4Q9JM99 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prg4Q9JM99 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Prg4Q9JM99 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.2■□□□□ 0.18
Prg4Q9JM99 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prg4Q9JM99 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prg4Q9JM99 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.18■□□□□ 0.18
Prg4Q9JM99 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Prg4Q9JM99 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.18■□□□□ 0.18
Prg4Q9JM99 Gm3375-201ENSMUST00000203929 796 ntBASIC16.18■□□□□ 0.18
Prg4Q9JM99 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.18■□□□□ 0.18
Prg4Q9JM99 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.17■□□□□ 0.18
Prg4Q9JM99 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prg4Q9JM99 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.16■□□□□ 0.18
Prg4Q9JM99 Idnk-204ENSMUST00000226010 1898 ntBASIC16.16■□□□□ 0.18
Prg4Q9JM99 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Mir8112-201ENSMUST00000184382 131 ntBASIC16.16■□□□□ 0.18
Prg4Q9JM99 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.16■□□□□ 0.18
Prg4Q9JM99 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prg4Q9JM99 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prg4Q9JM99 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prg4Q9JM99 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prg4Q9JM99 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms