Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Copb1Q9JIF7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Copb1Q9JIF7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Gm5874-201ENSMUST00000096101 508 ntBASIC19.48■□□□□ 0.71
Copb1Q9JIF7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Copb1Q9JIF7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.47■□□□□ 0.71
Copb1Q9JIF7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Copb1Q9JIF7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb1Q9JIF7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms