Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.23■□□□□ 0.99
Ube3bQ9ES34 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3bQ9ES34 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.23■□□□□ 0.99
Ube3bQ9ES34 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3bQ9ES34 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Ube3bQ9ES34 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3bQ9ES34 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Gm3375-201ENSMUST00000203929 796 ntBASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Gm4974-201ENSMUST00000209974 875 ntBASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Gm5417-201ENSMUST00000079706 384 ntBASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3bQ9ES34 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Idnk-204ENSMUST00000226010 1898 ntBASIC21.2■□□□□ 0.98
Ube3bQ9ES34 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3bQ9ES34 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ube3bQ9ES34 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3bQ9ES34 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Gm15565-201ENSMUST00000118890 427 ntBASIC21.17■□□□□ 0.98
Ube3bQ9ES34 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3bQ9ES34 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3bQ9ES34 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.16■□□□□ 0.98
Ube3bQ9ES34 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3bQ9ES34 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3bQ9ES34 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms