Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vps35Q9EQH3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Vps35Q9EQH3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps35Q9EQH3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps35Q9EQH3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps35Q9EQH3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps35Q9EQH3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps35Q9EQH3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Gm10653-202ENSMUST00000139570 835 ntBASIC17.83■□□□□ 0.44
Vps35Q9EQH3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Gm20760-201ENSMUST00000179197 648 ntBASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Gm38285-201ENSMUST00000192928 922 ntBASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps35Q9EQH3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.82■□□□□ 0.44
Vps35Q9EQH3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Fst-202ENSMUST00000223640 2612 ntBASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps35Q9EQH3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Gm27011-201ENSMUST00000182352 972 ntBASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps35Q9EQH3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps35Q9EQH3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.78■□□□□ 0.44
Vps35Q9EQH3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps35Q9EQH3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms