Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Dancr-204ENSMUST00000132389 2347 ntBASIC16.74■□□□□ 0.27
Hmgn3Q9DCB1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Hmgn3Q9DCB1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn3Q9DCB1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Idnk-204ENSMUST00000226010 1898 ntBASIC16.71■□□□□ 0.27
Hmgn3Q9DCB1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn3Q9DCB1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn3Q9DCB1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Gm13216-201ENSMUST00000117145 591 ntBASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Hmgn3Q9DCB1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn3Q9DCB1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms