Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmg20aQ9DC33 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmg20aQ9DC33 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Gm14117-201ENSMUST00000122417 843 ntBASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmg20aQ9DC33 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmg20aQ9DC33 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmg20aQ9DC33 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmg20aQ9DC33 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.27■□□□□ 0.19
Hmg20aQ9DC33 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmg20aQ9DC33 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmg20aQ9DC33 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmg20aQ9DC33 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Hmg20aQ9DC33 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmg20aQ9DC33 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Rps24-207ENSMUST00000224568 714 ntBASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmg20aQ9DC33 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmg20aQ9DC33 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms