Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csnk1dQ9DC28 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Gm10252-201ENSMUST00000209541 832 ntBASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Csnk1dQ9DC28 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csnk1dQ9DC28 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Gm10517-202ENSMUST00000192970 758 ntBASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Gm4974-201ENSMUST00000209974 875 ntBASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnk1dQ9DC28 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Csnk1dQ9DC28 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Csnk1dQ9DC28 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Csnk1dQ9DC28 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnk1dQ9DC28 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Mir5122-201ENSMUST00000175004 89 ntBASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Csnk1dQ9DC28 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms