Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm18025-201ENSMUST00000221733 862 ntBASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ssmem1Q9D9Y8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ssmem1Q9D9Y8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ssmem1Q9D9Y8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssmem1Q9D9Y8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssmem1Q9D9Y8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.33■□□□□ 0.05
Ssmem1Q9D9Y8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Gm10418-201ENSMUST00000100943 576 ntBASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Gm42545-201ENSMUST00000202755 922 ntBASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssmem1Q9D9Y8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms