Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tube1Q9D6T1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tube1Q9D6T1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.79■□□□□ 0.76
Tube1Q9D6T1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.79■□□□□ 0.76
Tube1Q9D6T1 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.79■□□□□ 0.76
Tube1Q9D6T1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Tube1Q9D6T1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tube1Q9D6T1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tube1Q9D6T1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tube1Q9D6T1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Tube1Q9D6T1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Tube1Q9D6T1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tube1Q9D6T1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tube1Q9D6T1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tube1Q9D6T1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Gm715-201ENSMUST00000117865 831 ntBASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tube1Q9D6T1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms