Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Gm8495-201ENSMUST00000188740 694 ntBASIC20.86■□□□□ 0.93
Ccdc7Q9D541 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc7Q9D541 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Mir2861-201ENSMUST00000175539 82 ntBASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Gm29791-202ENSMUST00000207888 369 ntBASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc7Q9D541 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.84■□□□□ 0.93
Ccdc7Q9D541 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.83■□□□□ 0.93
Ccdc7Q9D541 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc7Q9D541 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc7Q9D541 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.83■□□□□ 0.92
Ccdc7Q9D541 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc7Q9D541 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Rab3c-203ENSMUST00000224180 967 ntBASIC20.82■□□□□ 0.92
Ccdc7Q9D541 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc7Q9D541 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Flg-201ENSMUST00000050758 1488 ntBASIC20.81■□□□□ 0.92
Ccdc7Q9D541 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Gm27405-201ENSMUST00000184201 112 ntBASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc7Q9D541 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc7Q9D541 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms