Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim42Q9D2H5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Gm12251-201ENSMUST00000117893 792 ntBASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim42Q9D2H5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim42Q9D2H5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.77■□□□□ 0.44
Trim42Q9D2H5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim42Q9D2H5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim42Q9D2H5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim42Q9D2H5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.77■□□□□ 0.43
Trim42Q9D2H5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim42Q9D2H5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim42Q9D2H5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim42Q9D2H5 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.75■□□□□ 0.43
Trim42Q9D2H5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Haglr-201ENSMUST00000100000 2085 ntBASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim42Q9D2H5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms