Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ddx47Q9CWX9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx47Q9CWX9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx47Q9CWX9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx47Q9CWX9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx47Q9CWX9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.33■□□□□ 0.53
Ddx47Q9CWX9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx47Q9CWX9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ddx47Q9CWX9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx47Q9CWX9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx47Q9CWX9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx47Q9CWX9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx47Q9CWX9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx47Q9CWX9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms