Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Gm7889-201ENSMUST00000185591 958 ntBASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.1■□□□□ 0.33
Msantd3Q9CR78 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msantd3Q9CR78 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.08■□□□□ 0.33
Msantd3Q9CR78 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msantd3Q9CR78 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Gm27463-201ENSMUST00000183569 57 ntBASIC17.07■□□□□ 0.32
Msantd3Q9CR78 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.07■□□□□ 0.32
Msantd3Q9CR78 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Mir2861-201ENSMUST00000175539 82 ntBASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msantd3Q9CR78 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Gm6659-201ENSMUST00000174752 547 ntBASIC17.05■□□□□ 0.32
Msantd3Q9CR78 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msantd3Q9CR78 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms