Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sec61bQ9CQS8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm37805-201ENSMUST00000192612 1094 ntBASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm21814-202ENSMUST00000203277 873 ntBASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm16042-201ENSMUST00000204813 1247 ntBASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sec61bQ9CQS8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61bQ9CQS8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms