Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Mir5122-201ENSMUST00000175004 89 ntBASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Lsm7Q9CQQ8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Golph3-205ENSMUST00000228671 2842 ntBASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm7Q9CQQ8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Gm11643-201ENSMUST00000119578 864 ntBASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm7Q9CQQ8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm7Q9CQQ8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm7Q9CQQ8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Gm5417-201ENSMUST00000079706 384 ntBASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm7Q9CQQ8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms