Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trim33Q99PP7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.64■□□□□ 0.42
Trim33Q99PP7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim33Q99PP7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim33Q99PP7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim33Q99PP7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.63■□□□□ 0.41
Trim33Q99PP7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim33Q99PP7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.62■□□□□ 0.41
Trim33Q99PP7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.62■□□□□ 0.41
Trim33Q99PP7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim33Q99PP7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.61■□□□□ 0.41
Trim33Q99PP7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim33Q99PP7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Gm12896-201ENSMUST00000118430 226 ntBASIC17.6■□□□□ 0.41
Trim33Q99PP7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.6■□□□□ 0.41
Trim33Q99PP7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim33Q99PP7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.59■□□□□ 0.41
Trim33Q99PP7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms