Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh15Q99PJ1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh15Q99PJ1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh15Q99PJ1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh15Q99PJ1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pcdh15Q99PJ1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh15Q99PJ1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Gm28659-201ENSMUST00000188013 759 ntBASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh15Q99PJ1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh15Q99PJ1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh15Q99PJ1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Gm26039-201ENSMUST00000158152 144 ntBASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Mir8098-201ENSMUST00000184011 137 ntBASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Gm27525-201ENSMUST00000184465 107 ntBASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh15Q99PJ1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Gm15794-201ENSMUST00000120182 631 ntBASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh15Q99PJ1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh15Q99PJ1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Gm13884-201ENSMUST00000118103 829 ntBASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh15Q99PJ1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Gm29791-202ENSMUST00000207888 369 ntBASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh15Q99PJ1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms