Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn4Q99P72 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rtn4Q99P72 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn4Q99P72 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Gm29241-201ENSMUST00000189260 1096 ntBASIC22.58■■□□□ 1.21
Rtn4Q99P72 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.58■■□□□ 1.21
Rtn4Q99P72 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.58■■□□□ 1.21
Rtn4Q99P72 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4Q99P72 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.58■■□□□ 1.21
Rtn4Q99P72 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rtn4Q99P72 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rtn4Q99P72 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.57■■□□□ 1.2
Rtn4Q99P72 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.57■■□□□ 1.2
Rtn4Q99P72 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4Q99P72 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4Q99P72 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4Q99P72 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.55■■□□□ 1.2
Rtn4Q99P72 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rtn4Q99P72 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.54■■□□□ 1.2
Rtn4Q99P72 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.54■■□□□ 1.2
Rtn4Q99P72 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4Q99P72 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.53■■□□□ 1.2
Rtn4Q99P72 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Gm715-201ENSMUST00000117865 831 ntBASIC22.53■■□□□ 1.2
Rtn4Q99P72 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.53■■□□□ 1.2
Rtn4Q99P72 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4Q99P72 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.52■■□□□ 1.2
Rtn4Q99P72 AC154231.1-201ENSMUST00000220564 2175 ntBASIC22.52■■□□□ 1.2
Rtn4Q99P72 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rtn4Q99P72 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms