Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col25a1Q99MQ5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Gm21559-201ENSMUST00000220638 855 ntBASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col25a1Q99MQ5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Col25a1Q99MQ5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col25a1Q99MQ5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col25a1Q99MQ5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Gm12085-201ENSMUST00000119263 940 ntBASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col25a1Q99MQ5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Gm27389-201ENSMUST00000183622 195 ntBASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Gm27459-201ENSMUST00000184860 107 ntBASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col25a1Q99MQ5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.39■□□□□ 0.54
Col25a1Q99MQ5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
Col25a1Q99MQ5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col25a1Q99MQ5 Zfp783-201ENSMUST00000095946 670 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms