Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Gm27389-201ENSMUST00000183622 195 ntBASIC18.84■□□□□ 0.61
Clp1Q99LI9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Gm27704-201ENSMUST00000185094 107 ntBASIC18.84■□□□□ 0.61
Clp1Q99LI9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clp1Q99LI9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clp1Q99LI9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clp1Q99LI9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clp1Q99LI9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clp1Q99LI9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.82■□□□□ 0.6
Clp1Q99LI9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clp1Q99LI9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.81■□□□□ 0.6
Clp1Q99LI9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clp1Q99LI9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.8■□□□□ 0.6
Clp1Q99LI9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.8■□□□□ 0.6
Clp1Q99LI9 Gm13401-201ENSMUST00000117074 291 ntBASIC18.8■□□□□ 0.6
Clp1Q99LI9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clp1Q99LI9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clp1Q99LI9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Gm29518-201ENSMUST00000190858 372 ntBASIC18.79■□□□□ 0.6
Clp1Q99LI9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.79■□□□□ 0.6
Clp1Q99LI9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clp1Q99LI9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.78■□□□□ 0.6
Clp1Q99LI9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.78■□□□□ 0.6
Clp1Q99LI9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clp1Q99LI9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms