Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcc1Q99LI2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clcc1Q99LI2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcc1Q99LI2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Gm37292-201ENSMUST00000192062 758 ntBASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcc1Q99LI2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcc1Q99LI2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Clcc1Q99LI2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clcc1Q99LI2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcc1Q99LI2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms