Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cstf1Q99LC2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cstf1Q99LC2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cstf1Q99LC2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cstf1Q99LC2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.74■□□□□ 0.43
Cstf1Q99LC2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cstf1Q99LC2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cstf1Q99LC2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cstf1Q99LC2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cstf1Q99LC2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cstf1Q99LC2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cstf1Q99LC2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cstf1Q99LC2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cstf1Q99LC2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms