Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Tspan1Q99J59 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tspan1Q99J59 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.66■□□□□ 0.42
Tspan1Q99J59 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tspan1Q99J59 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Gm6576-201ENSMUST00000169678 883 ntBASIC17.65■□□□□ 0.42
Tspan1Q99J59 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.65■□□□□ 0.42
Tspan1Q99J59 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tspan1Q99J59 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tspan1Q99J59 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Fst-202ENSMUST00000223640 2612 ntBASIC17.64■□□□□ 0.41
Tspan1Q99J59 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tspan1Q99J59 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Mir1199-201ENSMUST00000117015 119 ntBASIC17.63■□□□□ 0.41
Tspan1Q99J59 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.63■□□□□ 0.41
Tspan1Q99J59 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.63■□□□□ 0.41
Tspan1Q99J59 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tspan1Q99J59 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms