Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sf3b5Q923D4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sf3b5Q923D4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sf3b5Q923D4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sf3b5Q923D4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sf3b5Q923D4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Gm18025-201ENSMUST00000221733 862 ntBASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sf3b5Q923D4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sf3b5Q923D4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sf3b5Q923D4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.71■□□□□ 0.1
Sf3b5Q923D4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Sf3b5Q923D4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sf3b5Q923D4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Gm27011-201ENSMUST00000182352 972 ntBASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sf3b5Q923D4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b5Q923D4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b5Q923D4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.67■□□□□ 0.1
Sf3b5Q923D4 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.67■□□□□ 0.1
Sf3b5Q923D4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms