Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Gm27275-201ENSMUST00000184318 272 ntBASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha3Q91Y16 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha3Q91Y16 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha3Q91Y16 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Gm18666-201ENSMUST00000190039 958 ntBASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha3Q91Y16 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha3Q91Y16 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha3Q91Y16 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha3Q91Y16 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha3Q91Y16 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha3Q91Y16 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha3Q91Y16 Gm11249-201ENSMUST00000117071 859 ntBASIC18.58■□□□□ 0.56
Pcdha3Q91Y16 Gm13168-201ENSMUST00000121771 632 ntBASIC18.58■□□□□ 0.56
Pcdha3Q91Y16 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha3Q91Y16 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha3Q91Y16 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha3Q91Y16 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Gm11927-201ENSMUST00000118472 759 ntBASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Zfp783-201ENSMUST00000095946 670 ntBASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha3Q91Y16 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Gm22240-201ENSMUST00000175225 82 ntBASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha3Q91Y16 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms