Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha8Q91Y12 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Gm5408-201ENSMUST00000197998 747 ntBASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Gm44549-201ENSMUST00000208351 577 ntBASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha8Q91Y12 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha8Q91Y12 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha8Q91Y12 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdha8Q91Y12 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha8Q91Y12 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha8Q91Y12 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdha8Q91Y12 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Gm2399-201ENSMUST00000104944 225 ntBASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdha8Q91Y12 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdha8Q91Y12 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdha8Q91Y12 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms