Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Idnk-204ENSMUST00000226010 1898 ntBASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Gm11643-201ENSMUST00000119578 864 ntBASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Gm27011-201ENSMUST00000182352 972 ntBASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Gm29791-202ENSMUST00000207888 369 ntBASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha9Q91Y11 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Gm13168-201ENSMUST00000121771 632 ntBASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Gm8520-201ENSMUST00000186517 868 ntBASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Gm18025-201ENSMUST00000221733 862 ntBASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha9Q91Y11 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha9Q91Y11 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Gm15378-201ENSMUST00000121894 207 ntBASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha9Q91Y11 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha9Q91Y11 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 Gm42545-201ENSMUST00000202755 922 ntBASIC18.9■□□□□ 0.62
Pcdha9Q91Y11 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms