Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Nespas-201ENSMUST00000143738 1083 ntBASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhac1Q91Y10 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhac1Q91Y10 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhac1Q91Y10 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Pcdhac1Q91Y10 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
Pcdhac1Q91Y10 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhac1Q91Y10 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Gm37179-201ENSMUST00000194862 823 ntBASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Tgds-204ENSMUST00000228543 1594 ntBASIC16.64■□□□□ 0.25
Pcdhac1Q91Y10 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhac1Q91Y10 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhac1Q91Y10 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhac1Q91Y10 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhac1Q91Y10 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhac1Q91Y10 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms