Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Gm11539-201ENSMUST00000119837 557 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Gm13436-201ENSMUST00000120418 567 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Gm13559-201ENSMUST00000120476 863 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb18Q91Y02 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Gm3375-201ENSMUST00000203929 796 ntBASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb18Q91Y02 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb18Q91Y02 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb18Q91Y02 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb18Q91Y02 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb18Q91Y02 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb18Q91Y02 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb18Q91Y02 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb18Q91Y02 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb18Q91Y02 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb18Q91Y02 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdhb18Q91Y02 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb18Q91Y02 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb18Q91Y02 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb18Q91Y02 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb18Q91Y02 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb18Q91Y02 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb18Q91Y02 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms