Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Gm42569-201ENSMUST00000200539 472 ntBASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Gm6365-201ENSMUST00000054711 744 ntBASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Gm8495-201ENSMUST00000188740 694 ntBASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb4Q91XZ6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb4Q91XZ6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb4Q91XZ6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb4Q91XZ6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb4Q91XZ6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb4Q91XZ6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms