Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga11Q91XY8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga11Q91XY8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga11Q91XY8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga11Q91XY8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga11Q91XY8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga11Q91XY8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga11Q91XY8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga11Q91XY8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms