Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb17Q91VD8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb17Q91VD8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb17Q91VD8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb17Q91VD8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb17Q91VD8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb17Q91VD8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb17Q91VD8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb17Q91VD8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms