Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.61■□□□□ 0.41
Vsx1Q91V10 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.61■□□□□ 0.41
Vsx1Q91V10 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.61■□□□□ 0.41
Vsx1Q91V10 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx1Q91V10 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.6■□□□□ 0.41
Vsx1Q91V10 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
Vsx1Q91V10 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.6■□□□□ 0.41
Vsx1Q91V10 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vsx1Q91V10 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Gm12085-201ENSMUST00000119263 940 ntBASIC17.59■□□□□ 0.41
Vsx1Q91V10 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Gm17661-201ENSMUST00000170317 270 ntBASIC17.59■□□□□ 0.41
Vsx1Q91V10 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.59■□□□□ 0.41
Vsx1Q91V10 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vsx1Q91V10 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Vsx1Q91V10 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vsx1Q91V10 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vsx1Q91V10 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vsx1Q91V10 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.58■□□□□ 0.41
Vsx1Q91V10 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vsx1Q91V10 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Gm27463-201ENSMUST00000183569 57 ntBASIC17.58■□□□□ 0.4
Vsx1Q91V10 Mir6349-201ENSMUST00000184059 97 ntBASIC17.58■□□□□ 0.4
Vsx1Q91V10 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.58■□□□□ 0.4
Vsx1Q91V10 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vsx1Q91V10 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Vsx1Q91V10 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.57■□□□□ 0.4
Vsx1Q91V10 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Gm22697-201ENSMUST00000175194 63 ntBASIC17.57■□□□□ 0.4
Vsx1Q91V10 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.57■□□□□ 0.4
Vsx1Q91V10 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.57■□□□□ 0.4
Vsx1Q91V10 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Vsx1Q91V10 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vsx1Q91V10 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vsx1Q91V10 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms