Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tram1Q91V04 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tram1Q91V04 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tram1Q91V04 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tram1Q91V04 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tram1Q91V04 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.34■□□□□ 0.05
Tram1Q91V04 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Tram1Q91V04 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tram1Q91V04 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Tram1Q91V04 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Tram1Q91V04 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tram1Q91V04 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tram1Q91V04 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.33■□□□□ 0.04
Tram1Q91V04 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Smad6-203ENSMUST00000179458 273 ntBASIC15.33■□□□□ 0.04
Tram1Q91V04 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Tram1Q91V04 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Tram1Q91V04 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.33■□□□□ 0.04
Tram1Q91V04 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Tram1Q91V04 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.33■□□□□ 0.04
Tram1Q91V04 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tram1Q91V04 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.33■□□□□ 0.04
Tram1Q91V04 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tram1Q91V04 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Tram1Q91V04 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tram1Q91V04 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tram1Q91V04 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.31■□□□□ 0.04
Tram1Q91V04 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.31■□□□□ 0.04
Tram1Q91V04 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.31■□□□□ 0.04
Tram1Q91V04 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tram1Q91V04 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tram1Q91V04 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.3■□□□□ 0.04
Tram1Q91V04 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms